Yep, PureFTPd would be the one installed. Anything else I can do besides disabling the Visual Compare date/time check?
[02:29:50] Remote file exist check: "generate.php".
[02:29:50] MLST generate.php
[02:29:50] 250-Begin
[02:29:50] type=file;size=2234;modify=20080825155815;UNIX.mode=0644;UNIX.uid=32063;UNIX.gid
=32020;unique=80g29cda5a; generate.php
[02:29:50] 250 End.
[02:29:50] Source File: Size=2234, SizeUnit=Byte, Time=2008-08-25T07:58:15, TimeFormat=Exact
[02:29:50] Destination File: Size=2234, SizeUnit=Byte, Time=2008-08-25T15:58:15, TimeFormat=Exact
[02:29:50] RecentTime=2008-08-25T09:29:50
[02:29:50] No rule matched. Default Action="Overwrite".
[02:29:50] TYPE I
[02:29:50] 200 TYPE is now 8-bit binary
[02:29:50] PASV
[02:29:50] 227 Entering Passive Mode (REMOVED,66,166)
[02:29:50] Opening data connection to REMOVED Port: 17062
[02:29:50] STOR generate.php
[02:29:50] 150 Accepted data connection
[02:29:50] 2234 bytes transferred. (17.4 KB/s) (125 ms)
[02:29:50] 226-File successfully transferred
[02:29:50] 226 0.135 seconds (measured here), 16.14 Kbytes per second
[02:29:50] MDTM 20080825075815 generate.php
[02:29:50] 550 Can't check for file existence
[02:29:50] MFMT 20080825075815 generate.php
[02:29:50] 500 Unknown command
[02:29:50] SITE UTIME generate.php 20080825075815 20080825075815 20080825075815 UTC
[02:29:50] 250 UTIME OK
[02:29:50] MLST generate.php
[02:29:51] 250-Begin
[02:29:51] type=file;size=2234;modify=20080825155815;UNIX.mode=0644;UNIX.uid=32063;UNIX.gid
=32020;unique=80g29cda5a; generate.php
[02:29:51] 250 End.